Notes

OGC protocol: specifications for processing. Used by Terradue and IRD.
xml-based interface: accept REST requests. Output in xml format following xsd.
Developed for BiOnym asking to Taverna staff to check for coherence. Some adjustment were necessary but works now for Taverna workflow.
To be used by FishBase in August 2014 version. To be compared with the call of API in the Statistical Manager.
Catalogue of WPS services available in the infrastructure: [[1]http://wps.statistical.d4science.org/wps/WebProcessingService?service=WPS&Request=GetCapabilities] which is read by WPS indexing engines. More information on the syntax in http://wps.statistical.d4science.org/wps/WebProcessingService?Request=DescribeProcess&Service=WPS&Version=1.0.0&Identifier=org.gcube.dataanalysis.statistical_manager_wps_algorithms.generated.Bionym_local
Index BiOnym in MyExperiment for Taverna users after one week to let Anton, Edward and Nicolas checking the political issues to be indexed in MyExperiment.
Ask Tony Rees, Yde de Jong, GBIF people, more? to check the interface (Nicolas, Edward; 'more' could include Dima, Rod Page, BioVel).

Ticket sent by Fabio.
Casey replied Friday morning and uploaded the corrections as version 5 (another subversion to be sent by Casey after integration of 2 matchers by default, see below).
Just an issue on double quotes around scientific names to be fixed.
Decision on matchers by default: GSAy first, TriGrams second. Let's start with that default and test.
Computing capacity for BiOnym: 16 synchronous requests are possible. Should be enough even if there are heavy requests (big files, several TAFs).

Integration of latest corrections.
Submission to day.
Few days for light review by CNR publishers and then published.
Discussion on most likely journals (expensive options like PLosOne discarded):
- Biological paper: target Biodiversity Informatics (Nicolas to check BioMed journals).
  - More spin-off papers are possible targeted at specific sub-communities; e.g. a paper demonstrating the use of BiOnym in Ecology/Biogeography for Ecological Informatics (http://www.journals.elsevier.com/ecological-informatics/) or Ecography (http://onlinelibrary.wiley.com/journal/10.1111/%28ISSN%291600-0587); or a paper demonstrating the use of BiOnym for BioInformatics/sequence analysis
- Informatics paper: not clear what such a paper would describe apart from the GCube infrastructure; needs some thinking.

Next meeting

Friday 20th June 2014, 10 am, changed from Thursday due to Holiday (again!) in the Philippines on 19th.