Upgrade Plan 211 gCubeApps

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gHN Upgrade Instructions

It should be carried as follows:

for GHNgCube Hosting Node. v 3.2.7

1) Upgrade to GHNgCube Hosting Node. v 3.3.0 using the following instructions 2) Upgrade to GHNgCube Hosting Node. v 3.4.0 using the following instructions


Infrastructure (13 Jul AM)

A fix for the Deployer 2.3 needs to be deployed. (https://support.d4science-ii.research-infrastructures.eu/ticket/422)

  • DONE (CERN) node1.p.d4science.research-infrastructures.eu:8000: patch Deployer 2.3
  • DONE (CERN) node1.p.d4science.research-infrastructures.eu:8080: patch Deployer 2.3
  • DONE (CERN) node2.p.d4science.research-infrastructures.eu:8080: patch Deployer 2.3
  • DONE (CERN) node17.p.d4science.research-infrastructures.eu:8080: patch Deployer 2.3
  • DONE (CERN) node11.p.d4science.research-infrastructures.eu:8080: patch Deployer 2.3

gCubeApps VOVirtual Organization; (13 Jul AM)

A fix for the Deployer 2.3 needs to be deployed. (https://support.d4science-ii.research-infrastructures.eu/ticket/422)


  • DONE (CERN) node66.p.d4science.research-infrastructures.eu:8000: patch Deployer 2.3
  • DONE (CERN) node66.p.d4science.research-infrastructures.eu:8080: patch Deployer 2.3
  • DONE (CERN) node65.p.d4science.research-infrastructures.eu:8080: patch Deployer 2.3
  • DONE (CERN) node36.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) rstudio.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node39.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node47.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node49.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node53.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node54.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node59.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node60.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node61.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node62.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node63.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3
  • DONE (CERN) node64.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.3

FARM VOVirtual Organization;

FARM Enabling Services (12 Jul PM)

In order to enable the upgrade to the new Maven based dynamic deployment of packages, we need to have a procedure for the upgrade:

  • The old and new RM are incompatible, cause they use 2 different services for Dependencies resolution and deployment ( SR vs SG)
  • In order to undeploy the current installed packages we need to use the old version of the RM services
  • In parallel the new version should be deployed in order to perform the new deployment
  • In addition the undeployment of packages must be performed with the old version of the Deployer Service, while the deployment with the new one.
  • The flow of action is the following.
    • remove the service from VREVirtual Research Environment. scopes before performing the undeployment ( we fond a bug in this case (https://support.d4science-ii.research-infrastructures.eu/ticket/429), and nodes must be patched before removing the scope)
    • undeploy the service
    • upgrade the GHNgCube Hosting Node. to version 3.3.0
    • Deploy the upgraded service using the new version of the RM.

For this reason only the GHNs where we need to upgrade services are going to be upgraded to GHNgCube Hosting Node. 3.3.0

gHNs:


  • DONE (CNR) node24.p.d4science.research-infrastructures.eu:8080: upgrade node ( restart )
  • DONE (CNR) node26.p.d4science.research-infrastructures.eu:8080: upgrade node ( restart )
  • DONE (CNR) node32.p.d4science.research-infrastructures.eu:8000: upgrade node ( restart )

Services:

  • DONE (CNR) node26.p.d4science.research-infrastructures.eu:8080: upgrade IS-Registry
  • DONE (CNR) node32.p.d4science.research-infrastructures.eu:8000: install RM

Configuration:

The following RuntimeResource must be configured


  • DONE Geo Server
  • DONE GeoNetwork
  • DONE RStudio
  • DONE TimeSeries Database
  • DONE Ecological Modeling Database
  • DONE PostGis Database
  • Obis database
  • Species Link
  • Worms
  • CoL
  • Maven Repository
  • Transect


The SG must be added to FARM scope and 2.9.0 profile registered on this scope.

FARM VOVirtual Organization;/VREVirtual Research Environment. Services (13 Jul AM)

gHNs:

  • DONE (FAO) ldvapp08.fao.org:8080: upgrade node (restart)
  • DONE (FAO) ldvapp08.fao.org:8081: upgrade node (restart)
  • DONE (CNR) node14.p.d4science.research-infrastructures.eu:8080: upgrade node(restart)
  • DONE (CNR) node28.p.d4science.research-infrastructures.eu:8080: upgrade node(restart)
  • DONE (CNR) node44.p.d4science.research-infrastructures.eu:8080 : upgrade node (restart)
  • DONE (NKUA) dl16.di.uoa.gr:8084 : upgrade node (restart)
  • DONE (NKUA) dl25.di.uoa.gr:8084 : upgrade node (restart)
  • DONE (NKUA) dl16.di.uoa.gr:8080 : upgrade node (restart)


Services:

a patch to the previous version of the deployer is needed (https://support.d4science-ii.research-infrastructures.eu/ticket/429)


  • DONE (CERN) node6.p.d4science.research-infrastructures.eu:8000 : patch Deployer 2.2
  • DONE (CERN) node9.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.2
  • DONE (CERN) node23.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.2
  • DONE (CERN) node27.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.2
  • DONE (CERN) node30.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.2
  • DONE (CERN) node33.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.2
  • DONE (CERN) node38.p.d4science.research-infrastructures.eu:8080 : patch Deployer 2.2
  • DONE (CERN) node37.p.d4science.research-infrastructures.eu:8080: patch Deployer 2.2
  • DONE (CERN) dl17.di.uoa.gr:8080 : patch Deployer 2.2
  • (CERN) dl23.di.uoa.gr:8080 : patch Deployer 2.2
  • DONE (CERN) dl25.di.uoa.gr:8080 : patch Deployer 2.2
  • DONE (CERN) node28.p.d4science.research-infrastructures.eu:8080:upgrade TS service
    • org.gcube.content-management.time-series.2-3-0
    • org.gcube.content-management.time-series-geo-tools.1-4-0
    • org.gcube.common.TSDBInterface.1-3-0
    • org.gcube.common.TSPostgresImplementation.1-3-0
    • org.gcube.common.GeoServerInterface.1-8-0
    • org.gcube.data-analysis.ecological-engine.1-2-0
    • org.gcube.content-management.codelist-manager.1-2-0
  • DONE (CERN) node44.p.d4science.research-infrastructures.eu:8080: upgrade VREModeler
  • DONE (CERN) node14.p.d4science.research-infrastructures.eu:8080: upgrade RM
  • (CERN) ldvapp08.fao.org:8080 : upgrade RM
  • DONE (CERN) dl16.di.uoa.gr:8080: upgrade RM
  • DONE (CERN) dl25.di.uoa.gr:8084: upgrade RM
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