EuBrazilOpenBIO VO 2.9.0

gHN Upgrade Instructions

It should be carried as follows:

1) Download the upgrade script from

wget http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/ghn-distribution/upgrade-scripts/upgrade-ghn-3-3-0.sh

and make it executable:

chmod 700 upgrade-ghn-3-3-0.sh

2) Verify that the GLOBUS_LOCATION environment variable is correctly set

echo $GLOBUS_LOCATION

3) Run the upgrade script with the following arguments:

• <port>: The port where the container runs.
• <restart/norestart>: tells if the container has to be restarted or not after the upgrade

./upgrade-ghn-3-3-0.sh <port> <restart/norestart>

Notes:

• The script ask for the removal of previous GHNgCube Hosting Node. logs ( recommended )

4) Verify the upgrade operation using the infrastructure monitoring tools

http://monitor.d4science.research-infrastructures.eu

5) Installation of the Encryption key

• on the GHNgCube Hosting Node. node

• for iMarine project partners

wget --user=<yourLdapUsername> --password=<yourLdapPassword> http://bscw.i-marine.research-infrastructures.eu/bscw/bscw.cgi/251512/symm.key -O $GLOBUS_LOCATION/config/symm.key

• for EUBrazilOpenBio project partners

wget --user=<yourLdapUsername> --password=<yourLdapPassword> http://bscw.eubrazilopenbio.research-infrastructures.eu/bscw/bscw.cgi/d252051/symm.key -O $GLOBUS_LOCATION/config/symm.key

EUBrazilOpenBIO VOVirtual Organization;

EUBrazilOpenBIO Enabling Services (4 Sept PM)

gHNs:

• DONE (CNR) node3.p.d4science.research-infrastructures.eu:8000: upgrade node ( restart )
• DONE (CNR) node4.p.d4science.research-infrastructures.eu:8080: upgrade node ( restart )
• DONE (CNR) node5.p.d4science.research-infrastructures.eu:8080: upgrade node ( restart )
• DONE (CNR) node3.p.d4science.research-infrastructures.eu:8080: upgrade node ( restart )

Services:

• DONE (CNR) node4.p.d4science.research-infrastructures.eu:8080: upgrade IS-Registry
• DONE (CNR) node3.p.d4science.research-infrastructures.eu:8000: upgrade RM

EUBrazilOpenBIo VOVirtual Organization;/VREVirtual Research Environment. Services (5 Sept AM)

Before upgrading to GHNgCube Hosting Node. 3.3.0 some of the running service must be first undeployed

• DONE (CNR) : node8.p.d4science.research-infrastructures.eu:8000 : undeploy VREModeler
• DONE (CNR) : node15.p.d4science.research-infrastructures.eu:8080 : undeploy FullText & FWD IndexLookups
• DONE (CNR) : node21.p.d4science.research-infrastructures.eu:8080: undeploy FullText & FWD IndexLookups

Configuration:

• DONE node11.p.d4science.research-infrastructures.eu:8080 : add GHNgCube Hosting Node. to EUBrazilianOpenBio scope
• DONE add SG Running Instance to EUBrazilianOpenBio scope
• DONE add the Software Gateway Generic Resource to EUBrazilianOpenBio scope
• DONE remove old ServiceProfiles from the Information System
• DONE populate trough SG the EUBrazilianOpenBio InformationSystem with Service Profiles.

GHNs to upgrade:

• DONE (CNR): node8.p.d4science.research-infrastructures.eu:8080: upgrade node ( restart )
• DONE (CNR) : node12.p.d4science.research-infrastructures.eu:8080 : upgrade node ( restart)
• DONE (CNR) : node15.p.d4science.research-infrastructures.eu:8080 : upgrade node (restart)
• DONE (CNR) : node19.p.d4science.research-infrastructures.eu:8080 : upgrade node (restart)
• DONE (CNR) : node21.p.d4science.research-infrastructures.eu:8080 : upgrade node (restart)
• DONE (CNR) : node34.p.d4science.research-infrastructures.eu:8080 : upgrade node (restart)
• DONE (CNR) : node16.p.d4science.research-infrastructures.eu:8080 : upgrade node (restart)
• DONE (CNR) : node18.p.d4science.research-infrastructures.eu:8080 : upgrade node (restart)
• (BSC) : bscgrid06.bsc.es:9090 : upgrade node (restart)
• (UFF): sn10.ic.uff.br:8080  : upgrade node (restart)
• (UPV) : gcube01.i3m.upv.es:8080 : upgrade node (restart)
• (UPV) : gcube01.i3m.upv.es:8081 : upgrade node (restart)
• (UPV) : gcube01.i3m.upv.es:8082 : upgrade node (restart)
• (UPV) : gcube01.i3m.upv.es:8083 : upgrade node (restart)
• (UPV) : gcube02.i3m.upv.es:8080 : upgrade node (restart)
• (UPV) : gcube02.i3m.upv.es:8081 : upgrade node (restart)
• (UPV) : gcube02.i3m.upv.es:8082 : upgrade node (restart)
• (UPV) : gcube02.i3m.upv.es:8083 : upgrade node (restart)
• (UPV) : gcube03.i3m.upv.es:8080 : upgrade node (restart)
• (UPV) : gcube03.i3m.upv.es:8081 : upgrade node (restart)
• (UPV) : gcube03.i3m.upv.es:8082 : upgrade node (restart)
• (UPV) : gcube03.i3m.upv.es:8083 : upgrade node (restart)
• (UPV) : gcube04.i3m.upv.es:8080 : upgrade node (restart)
• (UPV) : gcube04.i3m.upv.es:8081 : upgrade node (restart)
• (UPV) : gcube04.i3m.upv.es:8082 : upgrade node (restart)
• (UPV) : gcube04.i3m.upv.es:8083 : upgrade node (restart)
• (UPV) : gcube05.i3m.upv.es:8080 : upgrade node (restart)
• (UPV) : gcube05.i3m.upv.es:8081 : upgrade node (restart)
• (UPV) : gcube05.i3m.upv.es:8082 : upgrade node (restart)
• (UPV) : gcube05.i3m.upv.es:8083 : upgrade node (restart)

Services:

• DONE (CNR) : node8.p.d4science.research-infrastructures.eu:8000 : deploy VREModeler
• (CNR) : node15.p.d4science.research-infrastructures.eu:8080 : deploy FullText & FWD IndexLookups
• (CNR) : node21.p.d4science.research-infrastructures.eu:8080: deploy FullText & FWD IndexLookups
• (CNR) : node16.p.d4science.research-infrastructures.eu:8080: deploy Species Product Discovery
• (CNR) : node18.p.d4science.research-infrastructures.eu:8080: deploy FullText & FWD Index Management & Updater

Configuration:

• The following RuntimeResource must be configured
  • Geo Server
  • GeoNetwork
  • CoL
  • GBIF
  • speciesLink
  • BrazilianFlora